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Species belonging to selected taxon:

Brassica oleracea var. alboglabra



ABOUT THIS RECORD

ID: MNEST000322
species: Brassica oleracea var. alboglabra
miRNA family: MIRf427
source: miRNEST

Taxonomy by NCBI:
Brassica oleracea var. alboglabra Brassica oleracea Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAGAGCAAGAGCAGCTGCTTT

miRNA*
AGCCGTGGCTCTTGTCCTCCC

mismatches: 3
bulges: 0

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pre-miRNA
TGCAAGCCACCGTGATCTAAGGAGAGCAAGAGCAGCTGCTTTAAACATCGTTCCAACATCAACAGGAGCAGCTAAAGCCGTGGCTCTTGTCCTCCCTAAC
CTCAAAGGAAAGCT


dot-bracket secondary structure
....(((..((.(((..((.((((.((((((((.((.((((((......(((((..........)))))...)))))).)).)))))))).)))).))..
.)))..))...)))



SIMILARITIES
miRBase no hits

PMRD ath-miRf10919-akr: 5e-28

microPC no hits
UniProt sp|P19866|G3PA_SPIOL: 0.000008

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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